Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX9Q9Y5X1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 LYSMD4-203ENST00000378904 2122 ntBASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 AC046185.3-201ENST00000623228 1824 ntBASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 MIR7706-201ENST00000613747 67 ntBASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 AC107918.4-202ENST00000641623 219 ntBASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX9Q9Y5X1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 AC093909.1-201ENST00000504731 1122 ntBASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX9Q9Y5X1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SNX9Q9Y5X1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms