Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGB3Q9Y5G1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 CROCCP1-201ENST00000426910 5675 ntBASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 AC100803.2-201ENST00000562459 1963 ntBASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 TSSC2-201ENST00000450217 709 ntBASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 AC112698.1-201ENST00000510299 916 ntBASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 AC005332.3-201ENST00000589904 676 ntBASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGB3Q9Y5G1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms