Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 AC092647.4-201ENST00000457211 535 ntBASIC16.41■□□□□ 0.22
IFT52Q9Y366 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.41■□□□□ 0.22
IFT52Q9Y366 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT52Q9Y366 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 NFIC-211ENST00000641145 8399 ntBASIC16.4■□□□□ 0.22
IFT52Q9Y366 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
IFT52Q9Y366 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
IFT52Q9Y366 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.4■□□□□ 0.22
IFT52Q9Y366 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.4■□□□□ 0.22
IFT52Q9Y366 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.4■□□□□ 0.22
IFT52Q9Y366 MTCL1P1-201ENST00000446207 792 ntBASIC16.4■□□□□ 0.22
IFT52Q9Y366 AC112907.2-201ENST00000448639 330 ntBASIC16.4■□□□□ 0.22
IFT52Q9Y366 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.4■□□□□ 0.22
IFT52Q9Y366 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.4■□□□□ 0.22
IFT52Q9Y366 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
IFT52Q9Y366 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.4■□□□□ 0.22
IFT52Q9Y366 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
IFT52Q9Y366 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.4■□□□□ 0.22
IFT52Q9Y366 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.4■□□□□ 0.22
IFT52Q9Y366 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.4■□□□□ 0.22
IFT52Q9Y366 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.4■□□□□ 0.22
IFT52Q9Y366 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
IFT52Q9Y366 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT52Q9Y366 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
IFT52Q9Y366 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
IFT52Q9Y366 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT52Q9Y366 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT52Q9Y366 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
IFT52Q9Y366 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT52Q9Y366 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.39■□□□□ 0.21
IFT52Q9Y366 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT52Q9Y366 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT52Q9Y366 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
IFT52Q9Y366 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT52Q9Y366 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT52Q9Y366 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
IFT52Q9Y366 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
IFT52Q9Y366 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT52Q9Y366 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.39■□□□□ 0.21
IFT52Q9Y366 AC211429.1-201ENST00000415277 523 ntBASIC16.39■□□□□ 0.21
IFT52Q9Y366 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT52Q9Y366 KRT18P57-201ENST00000443599 1254 ntBASIC16.39■□□□□ 0.21
IFT52Q9Y366 KRT18P38-201ENST00000449496 1282 ntBASIC16.39■□□□□ 0.21
IFT52Q9Y366 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.39■□□□□ 0.21
IFT52Q9Y366 AC068472.1-201ENST00000474589 881 ntBASIC16.39■□□□□ 0.21
IFT52Q9Y366 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT52Q9Y366 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms