Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RCL1Q9Y2P8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RCL1Q9Y2P8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 AC046185.3-201ENST00000623228 1824 ntBASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 WWOX-216ENST00000569818 525 ntBASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 AC112497.1-201ENST00000624824 639 ntBASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RCL1Q9Y2P8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 TSPY26P-202ENST00000565928 3884 ntBASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 AC063926.3-201ENST00000624734 5658 ntBASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RCL1Q9Y2P8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms