Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HHLA3Q9XRX5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HHLA3Q9XRX5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
HHLA3Q9XRX5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
HHLA3Q9XRX5 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HHLA3Q9XRX5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
HHLA3Q9XRX5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.35
HHLA3Q9XRX5 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.35
HHLA3Q9XRX5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.83□□□□□ -0.35
HHLA3Q9XRX5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.83□□□□□ -0.35
HHLA3Q9XRX5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 LINC01238-205ENST00000567549 1107 ntBASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HHLA3Q9XRX5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 AL138688.1-201ENST00000624851 1594 ntBASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HHLA3Q9XRX5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms