Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 RNA5SP415-201ENST00000517246 115 ntBASIC18.43■□□□□ 0.54
CDH9Q9ULB4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
CDH9Q9ULB4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 GPR89P-201ENST00000407924 1495 ntBASIC18.42■□□□□ 0.54
CDH9Q9ULB4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 ZNF259P1-201ENST00000407656 1365 ntBASIC18.42■□□□□ 0.54
CDH9Q9ULB4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH9Q9ULB4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 AC090340.1-201ENST00000620778 4980 ntBASIC18.41■□□□□ 0.54
CDH9Q9ULB4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 UNC93B6-202ENST00000528242 690 ntBASIC18.41■□□□□ 0.54
CDH9Q9ULB4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 Z83851.2-201ENST00000609564 659 ntBASIC18.41■□□□□ 0.54
CDH9Q9ULB4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CDH9Q9ULB4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 AC104109.2-201ENST00000602919 1418 ntBASIC18.4■□□□□ 0.54
CDH9Q9ULB4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH9Q9ULB4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms