Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 AC098590.1-201ENST00000468126 897 ntBASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 AC144831.1-201ENST00000573312 2656 ntBASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 GMCL1P1-201ENST00000463439 1581 ntBASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 AC093010.1-201ENST00000473625 1624 ntBASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
UBQLN2Q9UHD9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 MYLKP1-201ENST00000509077 1580 ntBASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 AL121906.2-201ENST00000621597 723 ntBASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBQLN2Q9UHD9 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 KRASP1-201ENST00000407852 552 ntBASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 AC239809.2-201ENST00000415381 517 ntBASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
UBQLN2Q9UHD9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms