Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPHK1Q9NYA1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 AC012640.2-201ENST00000561606 901 ntBASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 AC107918.4-202ENST00000641623 219 ntBASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SPHK1Q9NYA1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 FZD10-202ENST00000539839 3282 ntBASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPHK1Q9NYA1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 AL135999.2-201ENST00000622438 1686 ntBASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 AC097637.2-201ENST00000624096 1997 ntBASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 LINC00896-202ENST00000609602 2128 ntBASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.79■□□□□ 0.28
SPHK1Q9NYA1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms