Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 AL121956.5-201ENST00000625261 221 ntBASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.56□□□□□ -0.08
LIN7CQ9NUP9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 REXO1L11P-201ENST00000620964 1927 ntBASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 KRT18P35-201ENST00000510488 1269 ntBASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 HYMAI.1-201ENST00000620949 238 ntBASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 AC079602.3-201ENST00000623931 403 ntBASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LIN7CQ9NUP9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 AL031133.1-201ENST00000406807 723 ntBASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 AC092597.1-201ENST00000487352 616 ntBASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 AC083849.1-201ENST00000615227 514 ntBASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 AC016396.2-201ENST00000562575 1417 ntBASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 KRT89P-201ENST00000620027 1478 ntBASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LIN7CQ9NUP9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms