Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CDC42SE1Q9NRR8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
CDC42SE1Q9NRR8 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 AC133963.1-201ENST00000504166 1679 ntBASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 REXO1L1P-202ENST00000608646 1974 ntBASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 C1R-201ENST00000535233 2211 ntTSL 2 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 LINC01101-201ENST00000622953 1884 ntBASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms