Protein–RNA interactions for Protein: Q9NRG1

PRTFDC1, Phosphoribosyltransferase domain-containing protein 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTFDC1Q9NRG1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRTFDC1Q9NRG1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
PRTFDC1Q9NRG1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
PRTFDC1Q9NRG1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 LYSMD4-203ENST00000378904 2122 ntBASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 SIGLEC30P-201ENST00000455569 941 ntBASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 BX005266.1-201ENST00000473402 457 ntBASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 NKAPP1-205ENST00000585790 367 ntBASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 SIGLEC16-201ENST00000599858 1437 ntBASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRTFDC1Q9NRG1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 AC046185.3-201ENST00000623228 1824 ntBASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 SART3-203ENST00000546611 1184 ntBASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 AC073592.4-201ENST00000623827 446 ntBASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRTFDC1Q9NRG1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 AL022326.1-202ENST00000641533 845 ntBASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRTFDC1Q9NRG1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms