Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 AL023973.1-201ENST00000624619 620 ntBASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN4Q9NQP4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 AP001094.4-201ENST00000579008 2176 ntBASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 AD000864.1-201ENST00000624076 2295 ntBASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 AC010203.1-204ENST00000548782 407 ntBASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 AC024563.2-201ENST00000603282 481 ntBASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN4Q9NQP4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 CROCCP2-202ENST00000412962 2773 ntBASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 AC016396.2-201ENST00000562575 1417 ntBASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 AC126755.1-201ENST00000525846 6405 ntBASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 AC009949.1-201ENST00000623048 1830 ntBASIC17.24■□□□□ 0.35
PFDN4Q9NQP4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PFDN4Q9NQP4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.23■□□□□ 0.35
PFDN4Q9NQP4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PFDN4Q9NQP4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms