Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 AC134684.3-201ENST00000641758 218 ntBASIC18.06■□□□□ 0.48
HPS4Q9NQG7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS4Q9NQG7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 AC003669.1-201ENST00000334569 611 ntBASIC18.05■□□□□ 0.48
HPS4Q9NQG7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 AC108073.2-201ENST00000464002 357 ntBASIC18.05■□□□□ 0.48
HPS4Q9NQG7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 AC109462.3-201ENST00000573934 613 ntBASIC18.05■□□□□ 0.48
HPS4Q9NQG7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 NCF1C-201ENST00000438382 1427 ntBASIC18.05■□□□□ 0.48
HPS4Q9NQG7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS4Q9NQG7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 AC135776.1-201ENST00000319817 2481 ntBASIC18.04■□□□□ 0.48
HPS4Q9NQG7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 SIGLEC30P-201ENST00000455569 941 ntBASIC18.04■□□□□ 0.48
HPS4Q9NQG7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 MTDHP5-201ENST00000598980 586 ntBASIC18.04■□□□□ 0.48
HPS4Q9NQG7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HPS4Q9NQG7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms