Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.48■□□□□ 0.55
CYLDQ9NQC7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.48■□□□□ 0.55
CYLDQ9NQC7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CYLDQ9NQC7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.48■□□□□ 0.55
CYLDQ9NQC7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYLDQ9NQC7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CYLDQ9NQC7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYLDQ9NQC7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.48■□□□□ 0.55
CYLDQ9NQC7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.48■□□□□ 0.55
CYLDQ9NQC7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CYLDQ9NQC7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.48■□□□□ 0.55
CYLDQ9NQC7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CYLDQ9NQC7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 FAM197Y8-203ENST00000450145 560 ntBASIC18.47■□□□□ 0.55
CYLDQ9NQC7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 AC064862.7-201ENST00000604520 867 ntBASIC18.47■□□□□ 0.55
CYLDQ9NQC7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.47■□□□□ 0.55
CYLDQ9NQC7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 KRT18P67-201ENST00000432816 1264 ntBASIC18.46■□□□□ 0.55
CYLDQ9NQC7 SCARNA2-201ENST00000458748 420 ntBASIC18.46■□□□□ 0.55
CYLDQ9NQC7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 AC073592.5-201ENST00000624854 528 ntBASIC18.46■□□□□ 0.55
CYLDQ9NQC7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CYLDQ9NQC7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CYLDQ9NQC7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.46■□□□□ 0.54
CYLDQ9NQC7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 AC132938.5-201ENST00000624980 1813 ntBASIC18.45■□□□□ 0.54
CYLDQ9NQC7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 LYSMD4-203ENST00000378904 2122 ntBASIC18.45■□□□□ 0.54
CYLDQ9NQC7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.45■□□□□ 0.54
CYLDQ9NQC7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 AC073592.4-201ENST00000623827 446 ntBASIC18.45■□□□□ 0.54
CYLDQ9NQC7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 SIGLEC16-201ENST00000599858 1437 ntBASIC18.45■□□□□ 0.54
CYLDQ9NQC7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms