Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VTA1Q9NP79 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.43■□□□□ 0.7
VTA1Q9NP79 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTA1Q9NP79 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.43■□□□□ 0.7
VTA1Q9NP79 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VTA1Q9NP79 AC129492.6-201ENST00000611383 1305 ntBASIC19.43■□□□□ 0.7
VTA1Q9NP79 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTA1Q9NP79 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTA1Q9NP79 AC009113.1-201ENST00000570267 2443 ntBASIC19.43■□□□□ 0.7
VTA1Q9NP79 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTA1Q9NP79 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VTA1Q9NP79 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTA1Q9NP79 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.42■□□□□ 0.7
VTA1Q9NP79 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTA1Q9NP79 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTA1Q9NP79 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTA1Q9NP79 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
VTA1Q9NP79 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTA1Q9NP79 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VTA1Q9NP79 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
VTA1Q9NP79 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VTA1Q9NP79 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VTA1Q9NP79 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.42■□□□□ 0.7
VTA1Q9NP79 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.42■□□□□ 0.7
VTA1Q9NP79 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTA1Q9NP79 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.42■□□□□ 0.7
VTA1Q9NP79 AL513210.1-201ENST00000629608 234 ntBASIC19.42■□□□□ 0.7
VTA1Q9NP79 ABALON-201ENST00000629058 1903 ntBASIC19.42■□□□□ 0.7
VTA1Q9NP79 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VTA1Q9NP79 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VTA1Q9NP79 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.42■□□□□ 0.7
VTA1Q9NP79 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
VTA1Q9NP79 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VTA1Q9NP79 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTA1Q9NP79 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTA1Q9NP79 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.42■□□□□ 0.7
VTA1Q9NP79 AC004408.2-201ENST00000623613 2777 ntBASIC19.42■□□□□ 0.7
VTA1Q9NP79 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.42■□□□□ 0.7
VTA1Q9NP79 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTA1Q9NP79 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VTA1Q9NP79 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.41■□□□□ 0.7
VTA1Q9NP79 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.41■□□□□ 0.7
VTA1Q9NP79 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VTA1Q9NP79 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.41■□□□□ 0.7
VTA1Q9NP79 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VTA1Q9NP79 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.41■□□□□ 0.7
VTA1Q9NP79 REXO1L3P-201ENST00000622202 1288 ntBASIC19.41■□□□□ 0.7
VTA1Q9NP79 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VTA1Q9NP79 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VTA1Q9NP79 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VTA1Q9NP79 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VTA1Q9NP79 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VTA1Q9NP79 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
VTA1Q9NP79 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VTA1Q9NP79 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VTA1Q9NP79 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
VTA1Q9NP79 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.41■□□□□ 0.7
VTA1Q9NP79 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.41■□□□□ 0.7
VTA1Q9NP79 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VTA1Q9NP79 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VTA1Q9NP79 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTA1Q9NP79 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTA1Q9NP79 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTA1Q9NP79 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VTA1Q9NP79 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTA1Q9NP79 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VTA1Q9NP79 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 AC004835.2-201ENST00000603762 682 ntBASIC19.4■□□□□ 0.7
VTA1Q9NP79 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTA1Q9NP79 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTA1Q9NP79 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTA1Q9NP79 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTA1Q9NP79 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
VTA1Q9NP79 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VTA1Q9NP79 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.39■□□□□ 0.7
VTA1Q9NP79 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
VTA1Q9NP79 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.39■□□□□ 0.7
VTA1Q9NP79 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
VTA1Q9NP79 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VTA1Q9NP79 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms