Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF304Q9HCX3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF304Q9HCX3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF304Q9HCX3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF304Q9HCX3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF304Q9HCX3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF304Q9HCX3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF304Q9HCX3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 SPDYE21P-201ENST00000413323 827 ntBASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 BX005266.1-201ENST00000473402 457 ntBASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 AC073592.4-201ENST00000623827 446 ntBASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
ZNF304Q9HCX3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 AC003669.1-201ENST00000334569 611 ntBASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 AL020989.1-201ENST00000422979 469 ntBASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 HNRNPDP1-201ENST00000439535 754 ntBASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 RNA5SP419-201ENST00000515908 135 ntBASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 OR7E14P-202ENST00000530490 1290 ntBASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 AL022326.1-202ENST00000641533 845 ntBASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 SIGLEC16-201ENST00000599858 1437 ntBASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF304Q9HCX3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF304Q9HCX3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms