Protein–RNA interactions for Protein: Q9HCN8

SDF2L1, Stromal cell-derived factor 2-like protein 1, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1Q9HCN8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 MIR564-202ENST00000385049 94 ntBASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 ESRRAP1-201ENST00000400596 1257 ntBASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 AC026271.3-201ENST00000571884 352 ntBASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 AL353708.3-201ENST00000610272 989 ntBASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SDF2L1Q9HCN8 REXO1L11P-201ENST00000620964 1927 ntBASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 KRT16P1-201ENST00000399124 1418 ntBASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 MIR149-201ENST00000384879 89 ntBASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 AC091390.4-202ENST00000476426 537 ntBASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 AC011298.2-201ENST00000617989 482 ntBASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 AL031985.4-201ENST00000642138 673 ntBASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SDF2L1Q9HCN8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms