Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC008267.7-201ENST00000624570 1194 ntBASIC16.03■□□□□ 0.16
CHD8Q9HCK8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 TEX28P1-201ENST00000613479 1221 ntBASIC16.03■□□□□ 0.16
CHD8Q9HCK8 TEX28P2-201ENST00000617764 1221 ntBASIC16.03■□□□□ 0.16
CHD8Q9HCK8 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 AC004840.1-201ENST00000636359 365 ntBASIC16.03■□□□□ 0.16
CHD8Q9HCK8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD8Q9HCK8 GABARAPL3-202ENST00000624044 1851 ntBASIC16.03■□□□□ 0.16
CHD8Q9HCK8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CHD8Q9HCK8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHD8Q9HCK8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHD8Q9HCK8 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CHD8Q9HCK8 AC087499.6-201ENST00000411576 835 ntBASIC16.02■□□□□ 0.16
CHD8Q9HCK8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.02■□□□□ 0.16
CHD8Q9HCK8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.02■□□□□ 0.16
CHD8Q9HCK8 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.02■□□□□ 0.16
CHD8Q9HCK8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.02■□□□□ 0.16
CHD8Q9HCK8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHD8Q9HCK8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHD8Q9HCK8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHD8Q9HCK8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CHD8Q9HCK8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CHD8Q9HCK8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CHD8Q9HCK8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CHD8Q9HCK8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CHD8Q9HCK8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
CHD8Q9HCK8 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.02■□□□□ 0.15
CHD8Q9HCK8 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
CHD8Q9HCK8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CHD8Q9HCK8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CHD8Q9HCK8 AC006538.1-201ENST00000567905 1585 ntBASIC16.02■□□□□ 0.15
CHD8Q9HCK8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.02■□□□□ 0.15
CHD8Q9HCK8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.02■□□□□ 0.15
CHD8Q9HCK8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHD8Q9HCK8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 MIR1908-201ENST00000410394 80 ntBASIC16.01■□□□□ 0.15
CHD8Q9HCK8 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 AC109462.3-201ENST00000573934 613 ntBASIC16.01■□□□□ 0.15
CHD8Q9HCK8 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 AL080243.2-201ENST00000418783 582 ntBASIC16.01■□□□□ 0.15
CHD8Q9HCK8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 GOLGA2P4-201ENST00000441462 777 ntBASIC16.01■□□□□ 0.15
CHD8Q9HCK8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.01■□□□□ 0.15
CHD8Q9HCK8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.01■□□□□ 0.15
CHD8Q9HCK8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CHD8Q9HCK8 AL590787.1-201ENST00000568856 1315 ntBASIC16■□□□□ 0.15
CHD8Q9HCK8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHD8Q9HCK8 BRWD1P1-201ENST00000401091 371 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms