Protein–RNA interactions for Protein: Q9HCJ0

TNRC6C, Trinucleotide repeat-containing gene 6C protein, humanhuman

Known RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6CQ9HCJ0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 AL138781.2-201ENST00000617896 1843 ntBASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 AL139327.4-201ENST00000612362 153 ntBASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 AP001059.3-201ENST00000619053 235 ntBASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNRC6CQ9HCJ0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 RN7SL589P-201ENST00000481268 310 ntBASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 RARRES2P8-201ENST00000566335 367 ntBASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNRC6CQ9HCJ0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 AC002056.1-201ENST00000395613 760 ntBASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 INGX-202ENST00000489074 768 ntBASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 LINC02560-201ENST00000596379 459 ntBASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
TNRC6CQ9HCJ0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 BASP1P1-201ENST00000430708 665 ntBASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 AC055876.3-201ENST00000431496 288 ntBASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 AC138649.4-201ENST00000612222 287 ntBASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 AC090164.3-201ENST00000610780 2143 ntBASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 AC138028.4-201ENST00000564984 1845 ntBASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TNRC6CQ9HCJ0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms