Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 VENTXP7-201ENST00000475503 772 ntBASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 AL096828.2-201ENST00000567259 1965 ntBASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 AL592071.1-201ENST00000611956 408 ntBASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 NPAP1P7-201ENST00000613027 823 ntBASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLK4Q9HAZ1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 AC132938.6-201ENST00000623828 1655 ntBASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 MTCL1P1-201ENST00000446207 792 ntBASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 AC011840.4-201ENST00000578471 627 ntBASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 AC124864.1-201ENST00000623408 392 ntBASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.02■□□□□ 0.32
CLK4Q9HAZ1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLK4Q9HAZ1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CLK4Q9HAZ1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLK4Q9HAZ1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.02■□□□□ 0.31
CLK4Q9HAZ1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.02■□□□□ 0.31
CLK4Q9HAZ1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CLK4Q9HAZ1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLK4Q9HAZ1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLK4Q9HAZ1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 UBALD1-205ENST00000590891 2641 ntBASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 KRT18P1-202ENST00000452408 1331 ntBASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLK4Q9HAZ1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms