Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 AC003669.1-201ENST00000334569 611 ntBASIC16.7■□□□□ 0.26
BRF2Q9HAW0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 KRT17P6-201ENST00000453795 1220 ntBASIC16.7■□□□□ 0.26
BRF2Q9HAW0 MINOS1P3-201ENST00000457048 203 ntBASIC16.7■□□□□ 0.26
BRF2Q9HAW0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 TOB2P1-201ENST00000469761 992 ntBASIC16.7■□□□□ 0.26
BRF2Q9HAW0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 AC009336.1-201ENST00000608941 1553 ntBASIC16.69■□□□□ 0.26
BRF2Q9HAW0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 STK19B-204ENST00000512515 211 ntBASIC16.69■□□□□ 0.26
BRF2Q9HAW0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 AC012313.1-201ENST00000593393 3059 ntBASIC16.69■□□□□ 0.26
BRF2Q9HAW0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
BRF2Q9HAW0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 INTS4P1-201ENST00000438455 1935 ntBASIC16.68■□□□□ 0.26
BRF2Q9HAW0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 IGHV3-47-201ENST00000425060 335 ntBASIC16.68■□□□□ 0.26
BRF2Q9HAW0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms