Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 AC116407.3-201ENST00000623905 1129 ntBASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 AL357033.4-201ENST00000617703 1807 ntBASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.33■□□□□ 0.36
POLR1BQ9H9Y6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 AL139384.1-201ENST00000612143 3047 ntBASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 AC112777.1-201ENST00000540175 1423 ntBASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 AL645608.8-201ENST00000606034 2086 ntBASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 KRT18P41-201ENST00000518924 1277 ntBASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.32■□□□□ 0.36
POLR1BQ9H9Y6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 AC005104.2-201ENST00000427818 678 ntBASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 HNRNPDP1-201ENST00000439535 754 ntBASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 AC009533.2-201ENST00000543664 586 ntBASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms