Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 AP000550.4-202ENST00000639755 178 ntBASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 AL121761.2-201ENST00000598007 1648 ntBASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 TPSP2-201ENST00000561760 610 ntBASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 AP002414.4-201ENST00000589764 1148 ntBASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 AC011467.2-201ENST00000598425 242 ntBASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 AC116353.5-201ENST00000638148 1699 ntBASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC40Q9H9A6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 AP002383.4-201ENST00000442518 975 ntBASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC40Q9H9A6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 AC046185.3-201ENST00000623228 1824 ntBASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 AC022211.2-201ENST00000585075 2527 ntBASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms