Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
VGLL1Q99990 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
VGLL1Q99990 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
VGLL1Q99990 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.28□□□□□ -0.28
VGLL1Q99990 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 LYSMD4-203ENST00000378904 2122 ntBASIC13.28□□□□□ -0.28
VGLL1Q99990 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
VGLL1Q99990 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.28□□□□□ -0.28
VGLL1Q99990 AC068418.2-201ENST00000577309 3703 ntBASIC13.28□□□□□ -0.28
VGLL1Q99990 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
VGLL1Q99990 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VGLL1Q99990 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.28□□□□□ -0.28
VGLL1Q99990 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.28□□□□□ -0.28
VGLL1Q99990 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VGLL1Q99990 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VGLL1Q99990 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VGLL1Q99990 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VGLL1Q99990 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VGLL1Q99990 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.27□□□□□ -0.28
VGLL1Q99990 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VGLL1Q99990 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
VGLL1Q99990 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VGLL1Q99990 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VGLL1Q99990 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VGLL1Q99990 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VGLL1Q99990 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
VGLL1Q99990 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VGLL1Q99990 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VGLL1Q99990 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VGLL1Q99990 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.27□□□□□ -0.28
VGLL1Q99990 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
VGLL1Q99990 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
VGLL1Q99990 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.27□□□□□ -0.29
VGLL1Q99990 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.27□□□□□ -0.29
VGLL1Q99990 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.27□□□□□ -0.29
VGLL1Q99990 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.27□□□□□ -0.29
VGLL1Q99990 AC034232.1-201ENST00000506026 1064 ntBASIC13.27□□□□□ -0.29
VGLL1Q99990 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.27□□□□□ -0.29
VGLL1Q99990 AC141257.4-201ENST00000634557 245 ntBASIC13.27□□□□□ -0.29
VGLL1Q99990 AC136944.6-201ENST00000634818 245 ntBASIC13.27□□□□□ -0.29
VGLL1Q99990 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.27□□□□□ -0.29
VGLL1Q99990 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
VGLL1Q99990 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.27□□□□□ -0.29
VGLL1Q99990 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 KRT89P-201ENST00000620027 1478 ntBASIC13.27□□□□□ -0.29
VGLL1Q99990 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
VGLL1Q99990 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.27□□□□□ -0.29
VGLL1Q99990 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.27□□□□□ -0.29
VGLL1Q99990 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
VGLL1Q99990 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 AL118508.1-201ENST00000613502 2345 ntBASIC13.27□□□□□ -0.29
VGLL1Q99990 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
VGLL1Q99990 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.27□□□□□ -0.29
VGLL1Q99990 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
VGLL1Q99990 UBALD1-205ENST00000590891 2641 ntBASIC13.26□□□□□ -0.29
VGLL1Q99990 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VGLL1Q99990 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VGLL1Q99990 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
VGLL1Q99990 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VGLL1Q99990 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
VGLL1Q99990 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VGLL1Q99990 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VGLL1Q99990 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
VGLL1Q99990 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VGLL1Q99990 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VGLL1Q99990 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.26□□□□□ -0.29
VGLL1Q99990 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.26□□□□□ -0.29
VGLL1Q99990 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VGLL1Q99990 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VGLL1Q99990 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VGLL1Q99990 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VGLL1Q99990 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.26□□□□□ -0.29
VGLL1Q99990 AC060834.1-201ENST00000443027 2032 ntBASIC13.26□□□□□ -0.29
VGLL1Q99990 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
VGLL1Q99990 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.26□□□□□ -0.29
VGLL1Q99990 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VGLL1Q99990 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VGLL1Q99990 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.26□□□□□ -0.29
VGLL1Q99990 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.26□□□□□ -0.29
VGLL1Q99990 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.26□□□□□ -0.29
VGLL1Q99990 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.26□□□□□ -0.29
VGLL1Q99990 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.26□□□□□ -0.29
VGLL1Q99990 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.26□□□□□ -0.29
VGLL1Q99990 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms