Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 AL135999.2-201ENST00000622438 1686 ntBASIC21.09■□□□□ 0.97
EYA3Q99504 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
EYA3Q99504 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.08■□□□□ 0.97
EYA3Q99504 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.08■□□□□ 0.97
EYA3Q99504 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.08■□□□□ 0.97
EYA3Q99504 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
EYA3Q99504 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
EYA3Q99504 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
EYA3Q99504 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
EYA3Q99504 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
EYA3Q99504 AC002056.1-201ENST00000395613 760 ntBASIC21.08■□□□□ 0.97
EYA3Q99504 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.08■□□□□ 0.97
EYA3Q99504 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.08■□□□□ 0.97
EYA3Q99504 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
EYA3Q99504 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.08■□□□□ 0.97
EYA3Q99504 AC093512.1-201ENST00000617969 520 ntBASIC21.08■□□□□ 0.97
EYA3Q99504 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
EYA3Q99504 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
EYA3Q99504 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EYA3Q99504 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
EYA3Q99504 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EYA3Q99504 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.96
EYA3Q99504 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
EYA3Q99504 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EYA3Q99504 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.08■□□□□ 0.96
EYA3Q99504 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.08■□□□□ 0.96
EYA3Q99504 AC092919.2-201ENST00000623631 1645 ntBASIC21.07■□□□□ 0.96
EYA3Q99504 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.07■□□□□ 0.96
EYA3Q99504 AC129492.6-201ENST00000611383 1305 ntBASIC21.07■□□□□ 0.96
EYA3Q99504 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EYA3Q99504 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.07■□□□□ 0.96
EYA3Q99504 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
EYA3Q99504 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EYA3Q99504 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.07■□□□□ 0.96
EYA3Q99504 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
EYA3Q99504 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
EYA3Q99504 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EYA3Q99504 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EYA3Q99504 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
EYA3Q99504 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
EYA3Q99504 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
EYA3Q99504 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.07■□□□□ 0.96
EYA3Q99504 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
EYA3Q99504 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
EYA3Q99504 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.07■□□□□ 0.96
EYA3Q99504 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.07■□□□□ 0.96
EYA3Q99504 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
EYA3Q99504 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.07■□□□□ 0.96
EYA3Q99504 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
EYA3Q99504 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.07■□□□□ 0.96
EYA3Q99504 BCL2-203ENST00000589955 5011 ntBASIC21.07■□□□□ 0.96
EYA3Q99504 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
EYA3Q99504 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EYA3Q99504 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
EYA3Q99504 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
EYA3Q99504 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
EYA3Q99504 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
EYA3Q99504 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EYA3Q99504 AC009113.1-201ENST00000570267 2443 ntBASIC21.06■□□□□ 0.96
EYA3Q99504 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EYA3Q99504 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.06■□□□□ 0.96
EYA3Q99504 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
EYA3Q99504 FLJ13224-201ENST00000313737 1514 ntBASIC21.06■□□□□ 0.96
EYA3Q99504 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EYA3Q99504 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
EYA3Q99504 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
EYA3Q99504 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EYA3Q99504 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.06■□□□□ 0.96
EYA3Q99504 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.06■□□□□ 0.96
EYA3Q99504 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.06■□□□□ 0.96
EYA3Q99504 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.06■□□□□ 0.96
EYA3Q99504 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
EYA3Q99504 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.06■□□□□ 0.96
EYA3Q99504 AL096865.1-201ENST00000606796 927 ntBASIC21.06■□□□□ 0.96
EYA3Q99504 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
EYA3Q99504 LINC00628-201ENST00000628516 1289 ntBASIC21.06■□□□□ 0.96
EYA3Q99504 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.06■□□□□ 0.96
EYA3Q99504 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.06■□□□□ 0.96
EYA3Q99504 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
EYA3Q99504 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EYA3Q99504 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EYA3Q99504 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EYA3Q99504 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EYA3Q99504 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EYA3Q99504 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
EYA3Q99504 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
EYA3Q99504 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
EYA3Q99504 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.05■□□□□ 0.96
EYA3Q99504 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.05■□□□□ 0.96
EYA3Q99504 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.05■□□□□ 0.96
EYA3Q99504 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EYA3Q99504 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EYA3Q99504 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EYA3Q99504 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EYA3Q99504 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
EYA3Q99504 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EYA3Q99504 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.05■□□□□ 0.96
EYA3Q99504 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.05■□□□□ 0.96
EYA3Q99504 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms