Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.78□□□□□ -0.36
MUC4Q99102 AGGF1P2-201ENST00000426656 2106 ntBASIC12.78□□□□□ -0.36
MUC4Q99102 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
MUC4Q99102 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
MUC4Q99102 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
MUC4Q99102 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
MUC4Q99102 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.78□□□□□ -0.36
MUC4Q99102 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.78□□□□□ -0.36
MUC4Q99102 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
MUC4Q99102 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
MUC4Q99102 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.78□□□□□ -0.36
MUC4Q99102 AC010460.3-201ENST00000511359 1579 ntBASIC12.78□□□□□ -0.36
MUC4Q99102 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.78□□□□□ -0.36
MUC4Q99102 SPDYE13P-201ENST00000445314 798 ntBASIC12.78□□□□□ -0.36
MUC4Q99102 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
MUC4Q99102 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.78□□□□□ -0.36
MUC4Q99102 AC012313.10-201ENST00000623509 926 ntBASIC12.78□□□□□ -0.36
MUC4Q99102 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
MUC4Q99102 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
MUC4Q99102 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.78□□□□□ -0.36
MUC4Q99102 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
MUC4Q99102 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 AC106886.4-201ENST00000623557 2502 ntBASIC12.78□□□□□ -0.36
MUC4Q99102 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MUC4Q99102 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
MUC4Q99102 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.78□□□□□ -0.36
MUC4Q99102 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
MUC4Q99102 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.77□□□□□ -0.36
MUC4Q99102 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
MUC4Q99102 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.77□□□□□ -0.36
MUC4Q99102 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
MUC4Q99102 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MUC4Q99102 HMGN1P19-201ENST00000436976 333 ntBASIC12.77□□□□□ -0.36
MUC4Q99102 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.77□□□□□ -0.36
MUC4Q99102 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.77□□□□□ -0.36
MUC4Q99102 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.77□□□□□ -0.36
MUC4Q99102 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MUC4Q99102 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.77□□□□□ -0.36
MUC4Q99102 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MUC4Q99102 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC12.77□□□□□ -0.36
MUC4Q99102 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MUC4Q99102 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
MUC4Q99102 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
MUC4Q99102 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
MUC4Q99102 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
MUC4Q99102 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
MUC4Q99102 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.77□□□□□ -0.37
MUC4Q99102 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
MUC4Q99102 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 IGHGP-201ENST00000390555 1178 ntBASIC12.77□□□□□ -0.37
MUC4Q99102 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.77□□□□□ -0.37
MUC4Q99102 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.77□□□□□ -0.37
MUC4Q99102 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
MUC4Q99102 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.77□□□□□ -0.37
MUC4Q99102 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MUC4Q99102 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
MUC4Q99102 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
MUC4Q99102 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
MUC4Q99102 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.76□□□□□ -0.37
MUC4Q99102 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.76□□□□□ -0.37
MUC4Q99102 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
MUC4Q99102 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MUC4Q99102 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms