Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 INTS4P1-201ENST00000438455 1935 ntBASIC16.8■□□□□ 0.28
UBE2E3Q969T4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 AC046185.3-201ENST00000623228 1824 ntBASIC16.8■□□□□ 0.28
UBE2E3Q969T4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 AC093458.2-201ENST00000623150 629 ntBASIC16.8■□□□□ 0.28
UBE2E3Q969T4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.8■□□□□ 0.28
UBE2E3Q969T4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
UBE2E3Q969T4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 STK19B-204ENST00000512515 211 ntBASIC16.79■□□□□ 0.28
UBE2E3Q969T4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 AD001527.2-201ENST00000622994 785 ntBASIC16.79■□□□□ 0.28
UBE2E3Q969T4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
UBE2E3Q969T4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 RCN1P2-201ENST00000398357 915 ntBASIC16.78■□□□□ 0.28
UBE2E3Q969T4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 UPK3BP1-201ENST00000428678 509 ntBASIC16.78■□□□□ 0.28
UBE2E3Q969T4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 AC099336.1-202ENST00000602961 463 ntBASIC16.78■□□□□ 0.28
UBE2E3Q969T4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2E3Q969T4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms