Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.05■□□□□ 0.16
HPS1Q92902 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.05■□□□□ 0.16
HPS1Q92902 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HPS1Q92902 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HPS1Q92902 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 AC092338.2-201ENST00000568827 1415 ntBASIC16.04■□□□□ 0.16
HPS1Q92902 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HPS1Q92902 AC093677.2-201ENST00000600169 1863 ntBASIC16.04■□□□□ 0.16
HPS1Q92902 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
HPS1Q92902 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.04■□□□□ 0.16
HPS1Q92902 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 RNF152P1-201ENST00000397754 604 ntBASIC16.04■□□□□ 0.16
HPS1Q92902 AC007663.1-201ENST00000438948 1240 ntBASIC16.04■□□□□ 0.16
HPS1Q92902 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.04■□□□□ 0.16
HPS1Q92902 AC022616.7-201ENST00000525383 220 ntBASIC16.04■□□□□ 0.16
HPS1Q92902 WWOX-216ENST00000569818 525 ntBASIC16.04■□□□□ 0.16
HPS1Q92902 AL138966.2-201ENST00000621997 464 ntBASIC16.04■□□□□ 0.16
HPS1Q92902 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HPS1Q92902 AL031432.5-201ENST00000641059 760 ntBASIC16.04■□□□□ 0.16
HPS1Q92902 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.04■□□□□ 0.16
HPS1Q92902 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HPS1Q92902 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.04■□□□□ 0.16
HPS1Q92902 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.04■□□□□ 0.16
HPS1Q92902 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.04■□□□□ 0.16
HPS1Q92902 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HPS1Q92902 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS1Q92902 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.04■□□□□ 0.16
HPS1Q92902 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
HPS1Q92902 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.03■□□□□ 0.16
HPS1Q92902 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.03■□□□□ 0.16
HPS1Q92902 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
HPS1Q92902 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HPS1Q92902 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 INGX-201ENST00000359239 846 ntBASIC16.03■□□□□ 0.16
HPS1Q92902 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 COX11P1-201ENST00000489116 835 ntBASIC16.03■□□□□ 0.16
HPS1Q92902 AL353719.1-201ENST00000566847 864 ntBASIC16.03■□□□□ 0.16
HPS1Q92902 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HPS1Q92902 AL023803.3-201ENST00000615559 522 ntBASIC16.03■□□□□ 0.16
HPS1Q92902 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HPS1Q92902 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC16.03■□□□□ 0.16
HPS1Q92902 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
HPS1Q92902 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.03■□□□□ 0.16
HPS1Q92902 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.03■□□□□ 0.16
HPS1Q92902 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
HPS1Q92902 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 AL662844.4-201ENST00000606367 2838 ntBASIC16.03■□□□□ 0.16
HPS1Q92902 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.03■□□□□ 0.16
HPS1Q92902 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HPS1Q92902 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS1Q92902 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HPS1Q92902 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HPS1Q92902 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS1Q92902 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS1Q92902 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS1Q92902 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms