Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 AC016396.2-201ENST00000562575 1417 ntBASIC20.53■□□□□ 0.88
STAG1Q8WVM7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 LINC00982-205ENST00000420957 435 ntBASIC20.53■□□□□ 0.88
STAG1Q8WVM7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 AC243591.1-201ENST00000452967 1364 ntBASIC20.53■□□□□ 0.88
STAG1Q8WVM7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
STAG1Q8WVM7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
STAG1Q8WVM7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
STAG1Q8WVM7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
STAG1Q8WVM7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
STAG1Q8WVM7 KRT18P27-201ENST00000427733 1299 ntBASIC20.52■□□□□ 0.88
STAG1Q8WVM7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
STAG1Q8WVM7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.52■□□□□ 0.88
STAG1Q8WVM7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.52■□□□□ 0.88
STAG1Q8WVM7 AC139887.3-201ENST00000568585 713 ntBASIC20.52■□□□□ 0.88
STAG1Q8WVM7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.52■□□□□ 0.88
STAG1Q8WVM7 AL353135.1-201ENST00000606729 504 ntBASIC20.52■□□□□ 0.88
STAG1Q8WVM7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.52■□□□□ 0.88
STAG1Q8WVM7 AC004706.3-202ENST00000621574 984 ntBASIC20.52■□□□□ 0.88
STAG1Q8WVM7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
STAG1Q8WVM7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
STAG1Q8WVM7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.52■□□□□ 0.87
STAG1Q8WVM7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
STAG1Q8WVM7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
STAG1Q8WVM7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 SLC25A1P3-201ENST00000395415 828 ntBASIC20.51■□□□□ 0.87
STAG1Q8WVM7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 AC012640.2-201ENST00000561606 901 ntBASIC20.51■□□□□ 0.87
STAG1Q8WVM7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 AC008735.5-201ENST00000623544 497 ntBASIC20.51■□□□□ 0.87
STAG1Q8WVM7 AF228730.7-201ENST00000641842 219 ntBASIC20.51■□□□□ 0.87
STAG1Q8WVM7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.51■□□□□ 0.87
STAG1Q8WVM7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 AL139424.1-201ENST00000607572 797 ntBASIC20.5■□□□□ 0.87
STAG1Q8WVM7 AC116407.3-201ENST00000623905 1129 ntBASIC20.5■□□□□ 0.87
STAG1Q8WVM7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 CROCCP2-202ENST00000412962 2773 ntBASIC20.5■□□□□ 0.87
STAG1Q8WVM7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
STAG1Q8WVM7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms