Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 RNF216P1-203ENST00000404404 2427 ntBASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 SLC25A3P1-201ENST00000443844 931 ntBASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 ATP5G1P1-201ENST00000448724 379 ntBASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4Y2Q8TD47 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 AC010460.3-201ENST00000511359 1579 ntBASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 AC113347.1-201ENST00000413321 391 ntBASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 AL137013.1-201ENST00000432946 1228 ntBASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 FAM210CP-201ENST00000445714 574 ntBASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 AC019129.2-201ENST00000609837 1235 ntBASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4Y2Q8TD47 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 MYCLP1-201ENST00000372451 1075 ntBASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 KRT18P21-201ENST00000515767 1272 ntBASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RPS4Y2Q8TD47 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms