Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.62□□□□□ -0.55
ALMS1Q8TCU4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 IGHV3-52-201ENST00000519770 353 ntBASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 AC129492.6-201ENST00000611383 1305 ntBASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
ALMS1Q8TCU4 DFFBP1-201ENST00000433250 979 ntBASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 TEX28P1-201ENST00000613479 1221 ntBASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 TEX28P2-201ENST00000617764 1221 ntBASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 MIR6787-201ENST00000616675 61 ntBASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 AL135999.2-201ENST00000622438 1686 ntBASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 AC105233.2-201ENST00000523697 349 ntBASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 AF228730.5-201ENST00000530288 346 ntBASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 WASH4P-201ENST00000564273 1246 ntBASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 AC027307.2-201ENST00000591252 911 ntBASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 AL031598.1-201ENST00000561511 1773 ntBASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 AL020996.1-203ENST00000536896 2307 ntBASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 AL009183.1-201ENST00000603760 355 ntBASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ALMS1Q8TCU4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms