Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3IL1Q8TBN0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RAB3IL1Q8TBN0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RAB3IL1Q8TBN0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB3IL1Q8TBN0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RAB3IL1Q8TBN0 LINC01311-201ENST00000565162 1445 ntBASIC17.46■□□□□ 0.39
RAB3IL1Q8TBN0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RAB3IL1Q8TBN0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 Z99916.2-201ENST00000604037 246 ntBASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB3IL1Q8TBN0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 KRT8P47-201ENST00000604727 1398 ntBASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 BX276092.7-203ENST00000637198 1536 ntBASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3IL1Q8TBN0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 MIR718-201ENST00000390190 70 ntBASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 PVRIG2P-201ENST00000435460 978 ntBASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 AP001412.1-201ENST00000608405 714 ntBASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms