Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 AC116407.2-201ENST00000613639 860 ntBASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHKBP1Q8TBC3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 DNAJB3-201ENST00000446806 729 ntBASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 KRT18P2-201ENST00000447938 1258 ntBASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 SIGLEC30P-201ENST00000455569 941 ntBASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 AC002347.1-201ENST00000569543 541 ntBASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 NCF1C-201ENST00000438382 1427 ntBASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHKBP1Q8TBC3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 STK25P1-201ENST00000585406 838 ntBASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.3■□□□□ 0.52
SHKBP1Q8TBC3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 BX276092.7-203ENST00000637198 1536 ntBASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 DDX43P3-201ENST00000441064 443 ntBASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 MIR3687-2-201ENST00000577708 61 ntBASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 MIR3687-1-201ENST00000614492 61 ntBASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.29■□□□□ 0.52
SHKBP1Q8TBC3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms