Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 AC018712.1-201ENST00000455767 687 ntBASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 AC093909.1-201ENST00000504731 1122 ntBASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 RNPS1P1-201ENST00000507437 918 ntBASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 IL9RP2-201ENST00000423948 1312 ntBASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDND2Q8NHS1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 AP005117.1-201ENST00000584346 1413 ntBASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 ABCD1P5-201ENST00000445663 754 ntBASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 AD000864.1-201ENST00000624076 2295 ntBASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 AC135776.1-201ENST00000319817 2481 ntBASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 AL139384.1-201ENST00000612143 3047 ntBASIC14.87□□□□□ -0.03
CLDND2Q8NHS1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CLDND2Q8NHS1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDND2Q8NHS1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDND2Q8NHS1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.86□□□□□ -0.03
CLDND2Q8NHS1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDND2Q8NHS1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDND2Q8NHS1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.86□□□□□ -0.03
CLDND2Q8NHS1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDND2Q8NHS1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDND2Q8NHS1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CLDND2Q8NHS1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDND2Q8NHS1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDND2Q8NHS1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms