Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LSMEM1Q8N8F7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.03■□□□□ 0.16
LSMEM1Q8N8F7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LSMEM1Q8N8F7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSMEM1Q8N8F7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSMEM1Q8N8F7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 AC103564.2-201ENST00000432853 1299 ntBASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 FAM210CP-201ENST00000445714 574 ntBASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 BX276092.5-203ENST00000456199 560 ntBASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSMEM1Q8N8F7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
LSMEM1Q8N8F7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.02■□□□□ 0.15
LSMEM1Q8N8F7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSMEM1Q8N8F7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSMEM1Q8N8F7 AC116353.5-201ENST00000638148 1699 ntBASIC16.02■□□□□ 0.15
LSMEM1Q8N8F7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSMEM1Q8N8F7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 AL136379.1-201ENST00000623471 2642 ntBASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 CHCHD2P8-201ENST00000429873 447 ntBASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 IGHV3-52-201ENST00000519770 353 ntBASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 AC116407.4-201ENST00000623319 1061 ntBASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.01■□□□□ 0.15
LSMEM1Q8N8F7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 CCS-201ENST00000310190 942 ntTSL 5 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 FAM220CP-201ENST00000395253 831 ntBASIC16■□□□□ 0.15
LSMEM1Q8N8F7 FXN-203ENST00000396366 922 ntTSL 2 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 TK1-204ENST00000590430 683 ntTSL 3 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 NTF6B-201ENST00000591913 560 ntBASIC16■□□□□ 0.15
LSMEM1Q8N8F7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16■□□□□ 0.15
LSMEM1Q8N8F7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms