Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 AP002383.4-201ENST00000442518 975 ntBASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 TPSP2-201ENST00000561760 610 ntBASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 AP002414.4-201ENST00000589764 1148 ntBASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 AL445228.2-201ENST00000605589 952 ntBASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 AC010331.1-201ENST00000611423 582 ntBASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 AL358472.4-201ENST00000633140 710 ntBASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 PP12613-201ENST00000424958 2230 ntBASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TTC9CQ8N5M4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.83□□□□□ -0.19
TTC9CQ8N5M4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.83□□□□□ -0.19
TTC9CQ8N5M4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TTC9CQ8N5M4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TTC9CQ8N5M4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 AL645608.8-201ENST00000606034 2086 ntBASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 AC139713.2-201ENST00000641328 2723 ntBASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 AC111152.3-201ENST00000569699 673 ntBASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 AC069148.1-201ENST00000608741 768 ntBASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 AC019129.2-201ENST00000609837 1235 ntBASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TTC9CQ8N5M4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 KRT17P6-201ENST00000453795 1220 ntBASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 TOB2P1-201ENST00000469761 992 ntBASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 AC091607.1-201ENST00000490318 1060 ntBASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 AC109462.3-201ENST00000573934 613 ntBASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 AP005901.3-202ENST00000581653 237 ntBASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms