Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARHGEF39Q8N4T4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARHGEF39Q8N4T4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
ARHGEF39Q8N4T4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARHGEF39Q8N4T4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARHGEF39Q8N4T4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ARHGEF39Q8N4T4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.45■□□□□ 0.22
ARHGEF39Q8N4T4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.45■□□□□ 0.22
ARHGEF39Q8N4T4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
ARHGEF39Q8N4T4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ARHGEF39Q8N4T4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 AP000347.1-202ENST00000435868 847 ntBASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 AC079776.4-201ENST00000511039 504 ntBASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.44■□□□□ 0.22
ARHGEF39Q8N4T4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 AC090340.1-201ENST00000620778 4980 ntBASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 AL590627.1-203ENST00000421194 1026 ntBASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 AC098831.1-202ENST00000438821 336 ntBASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 AL356488.2-201ENST00000602755 427 ntBASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 AC117500.6-201ENST00000624871 588 ntBASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 AL590787.1-201ENST00000568856 1315 ntBASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ARHGEF39Q8N4T4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 AC093909.1-201ENST00000504731 1122 ntBASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 AC136632.2-201ENST00000512891 861 ntBASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 SLC25A1P1-201ENST00000528351 927 ntBASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms