Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC008608.2-201ENST00000606089 416 ntBASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 AL355877.3-201ENST00000622820 899 ntBASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 AC009336.1-201ENST00000608941 1553 ntBASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 AC148477.5-201ENST00000625164 1645 ntBASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCUBE3Q8IX30 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 AC003669.1-201ENST00000334569 611 ntBASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 SPDYE21P-201ENST00000413323 827 ntBASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 AC046185.3-201ENST00000623228 1824 ntBASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCUBE3Q8IX30 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 AC079776.2-201ENST00000641154 1609 ntBASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 FGFR3P6-201ENST00000457012 610 ntBASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 NKAPP1-205ENST00000585790 367 ntBASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 LETM1P2-201ENST00000597330 2178 ntBASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.35■□□□□ 0.53
SCUBE3Q8IX30 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms