Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 PKD1P5-201ENST00000532415 10291 ntBASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 MMP23A-201ENST00000234610 1017 ntBASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 AC211429.1-201ENST00000415277 523 ntBASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 AC005104.2-201ENST00000427818 678 ntBASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 AP000525.1-201ENST00000608286 694 ntBASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM42Q8IWZ5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.46■□□□□ 0.38
TRIM42Q8IWZ5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRIM42Q8IWZ5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 AL603756.1-201ENST00000606511 2163 ntBASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 DOC2GP-204ENST00000639052 2548 ntBASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 MIR1238-201ENST00000408483 83 ntBASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 AC087499.1-201ENST00000418141 1075 ntBASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 SEC1P-202ENST00000473944 940 ntBASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 AC092338.2-201ENST00000568827 1415 ntBASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 AC103702.1-201ENST00000548801 2630 ntBASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRIM42Q8IWZ5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms