Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 RNPS1P1-201ENST00000507437 918 ntBASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 AP000867.4-201ENST00000641616 219 ntBASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRIM48Q8IWZ4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 AL031284.1-201ENST00000419297 478 ntBASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 IGHV3-52-201ENST00000519770 353 ntBASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 SART3-203ENST00000546611 1184 ntBASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 AC073592.5-201ENST00000624854 528 ntBASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM48Q8IWZ4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM48Q8IWZ4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.14■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms