Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 AC091607.1-201ENST00000490318 1060 ntBASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 KRT18P21-201ENST00000515767 1272 ntBASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 AL138831.2-201ENST00000606564 490 ntBASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC83Q8IWF9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC83Q8IWF9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC83Q8IWF9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC83Q8IWF9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.87
CCDC83Q8IWF9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC83Q8IWF9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC83Q8IWF9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 AL031133.1-201ENST00000406807 723 ntBASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 KRT8P26-201ENST00000534154 1276 ntBASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 AC092053.1-201ENST00000605787 1936 ntBASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC83Q8IWF9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 AC011840.4-201ENST00000578471 627 ntBASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 AC090616.6-201ENST00000582640 721 ntBASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC83Q8IWF9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms