Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APLFQ8IW19 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.38■□□□□ 0.37
APLFQ8IW19 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
APLFQ8IW19 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APLFQ8IW19 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.38■□□□□ 0.37
APLFQ8IW19 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APLFQ8IW19 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APLFQ8IW19 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
APLFQ8IW19 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APLFQ8IW19 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APLFQ8IW19 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
APLFQ8IW19 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
APLFQ8IW19 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.38■□□□□ 0.37
APLFQ8IW19 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APLFQ8IW19 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.38■□□□□ 0.37
APLFQ8IW19 MIR662-201ENST00000384847 95 ntBASIC17.38■□□□□ 0.37
APLFQ8IW19 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
APLFQ8IW19 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
APLFQ8IW19 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.38■□□□□ 0.37
APLFQ8IW19 MIR3917-201ENST00000580971 93 ntBASIC17.38■□□□□ 0.37
APLFQ8IW19 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
APLFQ8IW19 AP002414.4-201ENST00000589764 1148 ntBASIC17.38■□□□□ 0.37
APLFQ8IW19 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.38■□□□□ 0.37
APLFQ8IW19 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.38■□□□□ 0.37
APLFQ8IW19 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.38■□□□□ 0.37
APLFQ8IW19 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.38■□□□□ 0.37
APLFQ8IW19 AC079602.3-201ENST00000623931 403 ntBASIC17.38■□□□□ 0.37
APLFQ8IW19 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.38■□□□□ 0.37
APLFQ8IW19 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APLFQ8IW19 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APLFQ8IW19 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.38■□□□□ 0.37
APLFQ8IW19 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
APLFQ8IW19 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
APLFQ8IW19 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APLFQ8IW19 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APLFQ8IW19 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
APLFQ8IW19 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APLFQ8IW19 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APLFQ8IW19 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
APLFQ8IW19 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.37■□□□□ 0.37
APLFQ8IW19 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.37■□□□□ 0.37
APLFQ8IW19 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
APLFQ8IW19 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
APLFQ8IW19 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.37■□□□□ 0.37
APLFQ8IW19 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
APLFQ8IW19 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.37■□□□□ 0.37
APLFQ8IW19 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.37■□□□□ 0.37
APLFQ8IW19 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.37■□□□□ 0.37
APLFQ8IW19 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 AL136038.4-201ENST00000603606 1261 ntBASIC17.37■□□□□ 0.37
APLFQ8IW19 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
APLFQ8IW19 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
APLFQ8IW19 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
APLFQ8IW19 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
APLFQ8IW19 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
APLFQ8IW19 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.37■□□□□ 0.37
APLFQ8IW19 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.37■□□□□ 0.37
APLFQ8IW19 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
APLFQ8IW19 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
APLFQ8IW19 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
APLFQ8IW19 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.36■□□□□ 0.37
APLFQ8IW19 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
APLFQ8IW19 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APLFQ8IW19 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
APLFQ8IW19 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APLFQ8IW19 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.36■□□□□ 0.37
APLFQ8IW19 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APLFQ8IW19 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APLFQ8IW19 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APLFQ8IW19 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.36■□□□□ 0.37
APLFQ8IW19 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APLFQ8IW19 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APLFQ8IW19 AL845331.1-201ENST00000424978 1190 ntBASIC17.36■□□□□ 0.37
APLFQ8IW19 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.36■□□□□ 0.37
APLFQ8IW19 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APLFQ8IW19 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.36■□□□□ 0.37
APLFQ8IW19 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.36■□□□□ 0.37
APLFQ8IW19 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APLFQ8IW19 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms