Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.32■□□□□ 0.52
ALYREFQ86V81 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALYREFQ86V81 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
ALYREFQ86V81 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ALYREFQ86V81 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.32■□□□□ 0.52
ALYREFQ86V81 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.32■□□□□ 0.52
ALYREFQ86V81 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
ALYREFQ86V81 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.32■□□□□ 0.52
ALYREFQ86V81 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ALYREFQ86V81 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 CEND1P1-201ENST00000451006 455 ntBASIC18.31■□□□□ 0.52
ALYREFQ86V81 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 AJ011932.1-201ENST00000621707 465 ntBASIC18.31■□□□□ 0.52
ALYREFQ86V81 AC008735.5-201ENST00000623544 497 ntBASIC18.31■□□□□ 0.52
ALYREFQ86V81 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.31■□□□□ 0.52
ALYREFQ86V81 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALYREFQ86V81 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 MTMR9LP-203ENST00000426597 1545 ntBASIC18.3■□□□□ 0.52
ALYREFQ86V81 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 AL139400.1-201ENST00000366220 510 ntBASIC18.3■□□□□ 0.52
ALYREFQ86V81 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 RCN1P2-201ENST00000398357 915 ntBASIC18.3■□□□□ 0.52
ALYREFQ86V81 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 HCG11-201ENST00000411553 5696 ntBASIC18.3■□□□□ 0.52
ALYREFQ86V81 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALYREFQ86V81 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.3■□□□□ 0.52
ALYREFQ86V81 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALYREFQ86V81 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.29■□□□□ 0.52
ALYREFQ86V81 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ALYREFQ86V81 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
ALYREFQ86V81 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.29■□□□□ 0.52
ALYREFQ86V81 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALYREFQ86V81 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALYREFQ86V81 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALYREFQ86V81 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALYREFQ86V81 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ALYREFQ86V81 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
ALYREFQ86V81 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms