Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 AP005117.1-201ENST00000584346 1413 ntBASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 MYCLP1-201ENST00000372451 1075 ntBASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 LYSMD4-203ENST00000378904 2122 ntBASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 FAAHP1-202ENST00000446499 1238 ntBASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 STK25P1-201ENST00000585406 838 ntBASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 AC141586.5-201ENST00000624546 2050 ntBASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD3Q7Z3D4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 SAPCD2P3-201ENST00000455031 850 ntBASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 AC106795.1-205ENST00000512851 1056 ntBASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 AL139327.4-201ENST00000612362 153 ntBASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD3Q7Z3D4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms