Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC11.61□□□□□ -0.55
SCXQ7RTU7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.61□□□□□ -0.55
SCXQ7RTU7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.61□□□□□ -0.55
SCXQ7RTU7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.61□□□□□ -0.55
SCXQ7RTU7 AC099336.1-202ENST00000602961 463 ntBASIC11.61□□□□□ -0.55
SCXQ7RTU7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC11.61□□□□□ -0.55
SCXQ7RTU7 AC124864.1-201ENST00000623408 392 ntBASIC11.61□□□□□ -0.55
SCXQ7RTU7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.61□□□□□ -0.55
SCXQ7RTU7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC11.61□□□□□ -0.55
SCXQ7RTU7 AC233702.3-201ENST00000578656 1387 ntBASIC11.61□□□□□ -0.55
SCXQ7RTU7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC11.61□□□□□ -0.55
SCXQ7RTU7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
SCXQ7RTU7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SCXQ7RTU7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
SCXQ7RTU7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC11.61□□□□□ -0.55
SCXQ7RTU7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC11.61□□□□□ -0.55
SCXQ7RTU7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SCXQ7RTU7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
SCXQ7RTU7 TSPY26P-202ENST00000565928 3884 ntBASIC11.61□□□□□ -0.55
SCXQ7RTU7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 NFYC-AS1-201ENST00000606277 1687 ntBASIC11.6□□□□□ -0.55
SCXQ7RTU7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 AL353692.3-201ENST00000407031 1396 ntBASIC11.6□□□□□ -0.55
SCXQ7RTU7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 AP000593.1-201ENST00000393668 712 ntBASIC11.6□□□□□ -0.55
SCXQ7RTU7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 KRT17P6-201ENST00000453795 1220 ntBASIC11.6□□□□□ -0.55
SCXQ7RTU7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 ABALON-201ENST00000629058 1903 ntBASIC11.6□□□□□ -0.55
SCXQ7RTU7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SCXQ7RTU7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
SCXQ7RTU7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SCXQ7RTU7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SCXQ7RTU7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SCXQ7RTU7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC11.59□□□□□ -0.55
SCXQ7RTU7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SCXQ7RTU7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SCXQ7RTU7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC11.59□□□□□ -0.55
SCXQ7RTU7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms