Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 AC010240.3-201ENST00000607688 395 ntBASIC16.18■□□□□ 0.18
TUBA1AQ71U36 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.18■□□□□ 0.18
TUBA1AQ71U36 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 HOXB1-202ENST00000577092 1414 ntBASIC16.18■□□□□ 0.18
TUBA1AQ71U36 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1AQ71U36 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 KRT18P35-201ENST00000510488 1269 ntBASIC16.17■□□□□ 0.18
TUBA1AQ71U36 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 AC104390.1-201ENST00000555663 520 ntBASIC16.17■□□□□ 0.18
TUBA1AQ71U36 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 AL445228.2-201ENST00000605589 952 ntBASIC16.17■□□□□ 0.18
TUBA1AQ71U36 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 PCDHA1-201ENST00000378133 2726 ntBASIC16.17■□□□□ 0.18
TUBA1AQ71U36 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBA1AQ71U36 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms