Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 AC007686.3-201ENST00000619017 3487 ntBASIC9.47□□□□□ -0.89
LCA10Q71F78 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LCA10Q71F78 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LCA10Q71F78 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LCA10Q71F78 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LCA10Q71F78 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC9.47□□□□□ -0.89
LCA10Q71F78 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC9.47□□□□□ -0.89
LCA10Q71F78 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
LCA10Q71F78 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
LCA10Q71F78 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC9.47□□□□□ -0.89
LCA10Q71F78 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
LCA10Q71F78 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC9.47□□□□□ -0.89
LCA10Q71F78 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
LCA10Q71F78 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LCA10Q71F78 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
LCA10Q71F78 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LCA10Q71F78 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
LCA10Q71F78 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LCA10Q71F78 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LCA10Q71F78 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LCA10Q71F78 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LCA10Q71F78 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
LCA10Q71F78 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LCA10Q71F78 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
LCA10Q71F78 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC9.47□□□□□ -0.89
LCA10Q71F78 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
LCA10Q71F78 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LCA10Q71F78 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
LCA10Q71F78 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
LCA10Q71F78 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
LCA10Q71F78 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
LCA10Q71F78 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
LCA10Q71F78 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC9.46□□□□□ -0.89
LCA10Q71F78 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC9.46□□□□□ -0.89
LCA10Q71F78 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
LCA10Q71F78 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
LCA10Q71F78 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LCA10Q71F78 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
LCA10Q71F78 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC9.46□□□□□ -0.89
LCA10Q71F78 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LCA10Q71F78 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC9.46□□□□□ -0.89
LCA10Q71F78 OS9-205ENST00000413095 1660 ntTSL 2 BASIC9.46□□□□□ -0.89
LCA10Q71F78 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
LCA10Q71F78 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LCA10Q71F78 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
LCA10Q71F78 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC9.46□□□□□ -0.89
LCA10Q71F78 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
LCA10Q71F78 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
LCA10Q71F78 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
LCA10Q71F78 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
LCA10Q71F78 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC9.46□□□□□ -0.9
LCA10Q71F78 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LCA10Q71F78 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
LCA10Q71F78 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC9.46□□□□□ -0.9
LCA10Q71F78 MIR663A-201ENST00000385250 93 ntBASIC9.46□□□□□ -0.9
LCA10Q71F78 DUSP5P2-201ENST00000426873 1033 ntBASIC9.46□□□□□ -0.9
LCA10Q71F78 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC9.46□□□□□ -0.9
LCA10Q71F78 NME1-207ENST00000480143 964 ntTSL 2 BASIC9.46□□□□□ -0.9
LCA10Q71F78 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC9.46□□□□□ -0.9
LCA10Q71F78 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
LCA10Q71F78 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC9.46□□□□□ -0.9
LCA10Q71F78 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC9.46□□□□□ -0.9
LCA10Q71F78 AC080038.1-201ENST00000611274 1154 ntBASIC9.46□□□□□ -0.9
LCA10Q71F78 NID2-208ENST00000617139 3827 ntTSL 5 BASIC9.46□□□□□ -0.9
LCA10Q71F78 AL050303.2-201ENST00000619798 666 ntBASIC9.46□□□□□ -0.9
LCA10Q71F78 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC9.46□□□□□ -0.9
LCA10Q71F78 AC073111.5-205ENST00000641717 521 ntBASIC9.46□□□□□ -0.9
LCA10Q71F78 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LCA10Q71F78 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
LCA10Q71F78 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LCA10Q71F78 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
LCA10Q71F78 UBQLN4P1-201ENST00000461599 1801 ntBASIC9.46□□□□□ -0.9
LCA10Q71F78 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC9.46□□□□□ -0.9
LCA10Q71F78 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LCA10Q71F78 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LCA10Q71F78 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC9.46□□□□□ -0.9
LCA10Q71F78 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC9.46□□□□□ -0.9
LCA10Q71F78 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC9.46□□□□□ -0.9
LCA10Q71F78 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
LCA10Q71F78 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LCA10Q71F78 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC9.46□□□□□ -0.9
LCA10Q71F78 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LCA10Q71F78 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC9.46□□□□□ -0.9
LCA10Q71F78 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LCA10Q71F78 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC9.46□□□□□ -0.9
LCA10Q71F78 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LCA10Q71F78 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LCA10Q71F78 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
LCA10Q71F78 CICP20-201ENST00000443330 2801 ntBASIC9.46□□□□□ -0.9
LCA10Q71F78 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC9.46□□□□□ -0.9
LCA10Q71F78 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LCA10Q71F78 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
LCA10Q71F78 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
LCA10Q71F78 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC9.45□□□□□ -0.9
LCA10Q71F78 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
LCA10Q71F78 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC9.45□□□□□ -0.9
LCA10Q71F78 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
LCA10Q71F78 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LCA10Q71F78 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LCA10Q71F78 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms