Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 AL049757.1-201ENST00000616842 1596 ntBASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 AC046158.3-201ENST00000624947 2558 ntBASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 AC011467.2-201ENST00000598425 242 ntBASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NHLRC1Q6VVB1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 AC011676.5-201ENST00000624864 2660 ntBASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 NKILA-202ENST00000614771 2598 ntBASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 AC002558.1-201ENST00000488906 803 ntBASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NHLRC1Q6VVB1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.71■□□□□ 0.1
NHLRC1Q6VVB1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NHLRC1Q6VVB1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NHLRC1Q6VVB1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NHLRC1Q6VVB1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
NHLRC1Q6VVB1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 KRT17P6-201ENST00000453795 1220 ntBASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 TOB2P1-201ENST00000469761 992 ntBASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 AC009533.2-201ENST00000543664 586 ntBASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms