Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KCNIP4Q6PIL6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 AL109923.1-201ENST00000618799 583 ntBASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.57□□□□□ -0.24
KCNIP4Q6PIL6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 RCC2P3-201ENST00000418112 1537 ntBASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 NCF1B-203ENST00000435988 1254 ntBASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 AL050303.2-201ENST00000619798 666 ntBASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 AC133041.1-202ENST00000642053 222 ntBASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 AC024909.3-201ENST00000611513 2257 ntBASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.56□□□□□ -0.24
KCNIP4Q6PIL6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms