Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 AC090616.6-201ENST00000582640 721 ntBASIC15.93■□□□□ 0.14
NIPAL3Q6P499 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 CHCHD2P8-201ENST00000429873 447 ntBASIC15.92■□□□□ 0.14
NIPAL3Q6P499 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 MTCL1P1-201ENST00000446207 792 ntBASIC15.92■□□□□ 0.14
NIPAL3Q6P499 AC068472.1-201ENST00000474589 881 ntBASIC15.92■□□□□ 0.14
NIPAL3Q6P499 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 AL592071.1-201ENST00000611956 408 ntBASIC15.92■□□□□ 0.14
NIPAL3Q6P499 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.92■□□□□ 0.14
NIPAL3Q6P499 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 AC016734.2-201ENST00000624325 1377 ntBASIC15.91■□□□□ 0.14
NIPAL3Q6P499 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 TSSC2-201ENST00000450217 709 ntBASIC15.91■□□□□ 0.14
NIPAL3Q6P499 AC112698.1-201ENST00000510299 916 ntBASIC15.91■□□□□ 0.14
NIPAL3Q6P499 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 AC069148.1-201ENST00000608741 768 ntBASIC15.91■□□□□ 0.14
NIPAL3Q6P499 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 TNRC18P3-201ENST00000441896 2691 ntBASIC15.91■□□□□ 0.14
NIPAL3Q6P499 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NIPAL3Q6P499 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
NIPAL3Q6P499 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NIPAL3Q6P499 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.9■□□□□ 0.14
NIPAL3Q6P499 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NIPAL3Q6P499 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NIPAL3Q6P499 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NIPAL3Q6P499 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NIPAL3Q6P499 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NIPAL3Q6P499 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NIPAL3Q6P499 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NIPAL3Q6P499 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NIPAL3Q6P499 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NIPAL3Q6P499 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NIPAL3Q6P499 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.9■□□□□ 0.14
NIPAL3Q6P499 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NIPAL3Q6P499 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms